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Alternaria
Scientific classification
Domain:	Eukaryota
Kingdom:	Fungi
Division:	Ascomycota
Class:	Dothideomycetes
Order:	Pleosporales
Family:	Pleosporaceae
Genus:	Alternaria; Nees
Species
	Many, see text

Alternaria is a genus of Deuteromycetes fungi. All species are known as major plant pathogens. They are also common allergens in humans, growing indoors and causing hay fever or hypersensitivity reactions that sometimes lead to asthma. They are present in the human mycobiome and readily cause opportunistic infections in immunocompromised people such as AIDS patients.

There were about 600 species in the genus in 2023 (although in 2008 the Dictionary of Fungi only listed 299^[1]^[2]). They are ubiquitous in the environment and are a natural part of funga almost everywhere. They are normal agents of decay and decomposition. The spores are airborne and found in the soil and water, as well as indoors and on objects. The club-shaped spores are single or form long chains. They can grow thick colonies which are usually green, black, or gray.^[2]

At least 20% of agricultural spoilage is caused by Alternaria species, with the most severe losses reaching 80% of yield.^[2] Many human health disorders can be caused by these fungi, which grow on skin and mucous membranes, including on the eyeballs and within the respiratory tract. Allergies are common, but serious infections are rare, except in people with compromised immune systems. However, species of this fungal genus are often prolific producers of a variety of toxic compounds. The effects most of these compounds have on animal and plant health are not well known. Many species of alternaria modify their secondary metabolites by sulfoconjugation;^[3] however, the role of this process is not yet understood. The terms alternariosis and alternariatoxicosis are used for disorders in humans and animals caused by a fungus in this genus.

Not all Alternaria species are pests and pathogens; some have shown promise as biocontrol agents against invasive plant species. Some species have also been reported as endophytic microorganisms with highly bioactive metabolites.^[4]

The genus is now known to be polyphyletic.^[5]

Species

As of 5 August 2023^[update], the GBIF lists up to 602 species,^[7] while Species Fungorum lists about 645 species.^[8]

A selected few species are shown here.

Alternaria alternata – Causes early blight of potato, leaf spot disease in Withania somnifera^[9]
Alternaria allii - causes onion leaf blight
Alternaria arborescens – causes stem canker of tomato
Alternaria arbusti – causes leaf lesions on Asian pear
Alternaria blumeae – causes lesions on Blumea aurita
Alternaria brassicae – infests many vegetables and roses^[2]
Alternaria brassicicola – grows on cole crops^[2]
Alternaria burnsii – causing cumin blossom blight
Alternaria carotiincultae – causes leaf blight on carrot
Alternaria carthami
Alternaria celosiae
Alternaria cinerariae
Alternaria citri – causes black rot on citrus plants
Alternaria conjuncta – grows on parsnip
Alternaria cucumerina – grows on various cucurbits
Alternaria dauci – grows on carrot
Alternaria dianthi
Alternaria dianthicola
Alternaria eichhorniae – infests water hyacinth plants, used as bioherbicide against these weeds
Alternaria euphorbiicola – infests cole crops
Alternaria eureka
Alternaria gaisen – causes ringspot disease of pear
Alternaria helianthi
Alternaria helianthicola
Alternaria hungarica
Alternaria infectoria – infests wheat
Alternaria japonica – infests cole crops
Alternaria limicola – earliest diverging lineage of Section Porri
Alternaria linicola - linseed plants (Linum usitatissimum)^[10]
Alternaria longipes – infects tobacco
Alternaria mali
Alternaria molesta – may cause skin lesions on porpoises
Alternaria panax – causes ginseng blight
Alternaria perpunctulata
Alternaria petroselini – causes parsley leaf blight
Alternaria porri
Alternaria quercicola
Alternaria radicina – causes carrot decay
Alternaria raphani
Alternaria saponariae
Alternaria selini – causes parsley crown decay
Alternaria senecionis
Alternaria solani – causes early blight in potatoes and tomatoes
Alternaria smyrnii – infests alexanders and parsleys
Alternaria tenuissima
Alternaria triticina
Alternaria ventricosa
Alternaria zinniae

References

^ Kirk PM, Cannon PF, Minter DW, Stalpers JA (2008). Dictionary of the Fungi. 10th ed. Wallingford: CABI. p. 22. ISBN 978-0-85199-826-8.
^ ^a ^b ^c ^d ^e Nowicki, Marcin; et al. (30 August 2012). "Alternaria black bpot of crucifers: Symptoms, importance of disease, and perspectives of resistance breeding". Vegetable Crops Research Bulletin. 76 (2012): 5–19. doi:10.2478/v10032-012-0001-6.
^ Kelman, MJ; Renaud, JB; Seifert, KA; Mack, J; Sivagnanam, K; Yeung, KK; Sumarah, MW (15 October 2015). "Identification of six new Alternaria sulfoconjugated metabolites by high-resolution neutral loss filtering". Rapid Commun Mass Spectrom. 29 (19): 1805–1810. Bibcode:2015RCMS...29.1805K. doi:10.1002/rcm.7286. PMID 26331931.
^ Karwehl S, Stadler M (July 2016). "Exploitation of fungal biodiversity for discovery of novel antibiotics". Current Topics in Microbiology and Immunology. 398: 303–338. doi:10.1007/82_2016_496. ISBN 978-3-319-49282-7. PMID 27422786.
^ Aschehoug, Erik T.; Metlen, Kerry L.; Callaway, Ragan M.; Newcombe, George (2012). "Fungal endophytes directly increase the competitive effects of an invasive forb". Ecology. 93 (1): 3–8. doi:10.1890/11-1347.1. PMID 22486080.
^ Ran Yuping (2016). "Observation of Fungi, Bacteria, and Parasites in Clinical Skin Samples Using Scanning Electron Microscopy". In Janecek, Milos; Kral, Robert (eds.). Modern Electron Microscopy in Physical and Life Sciences. InTech. doi:10.5772/61850. ISBN 978-953-51-2252-4. S2CID 53472683.
^ "Alternaria Nees ex Wallroth, 1816". www.gbif.org. Retrieved 28 July 2023.
^ "Species Fungorum - Search Page - Alternaria". www.speciesfungorum.org. Retrieved 5 August 2023.
^ Pati, Pratap Kumar; Sharma, Monica; Salar, Raj Kumar; Sharma, Ashutosh; Gupta, A. P.; Singh, B. (8 January 2009). "Studies on leaf spot disease of Withania somnifera and its impact on secondary metabolites". Indian Journal of Microbiology. 48 (4): 432–437. doi:10.1007/s12088-008-0053-y. PMC 3476785. PMID 23100743.
^ Evans, N.; McRoberts, N.; Hill, R.A.; Marshall, G. (1996). "Phytotoxin production by Alternaria linicola and phytoalexin production by the linseed host". Ann. Appl. Biol. 129 (3): 415–431. doi:10.1111/j.1744-7348.1996.tb05765.x.

Other sources

Lawrence, DP; Park, MS; Pryor, BM (2012). "Nimbya and Embellisia revisited, with nov. comb. for Alternaria celosiae and A. perpunctulata". Mycological Progress. 11 (3): 799–815. doi:10.1007/s11557-011-0793-7. S2CID 18225986.
Lawrence, DP; Gannibal, PB; Peever, TL; Pryor, BM (2013). "The sections of Alternaria: formalizing species-group concepts". Mycologia. 105 (3): 530–546. doi:10.3852/12-249. PMID 23687125. S2CID 31226062.
Asan, A (2015). "Checklist of Alternaria Species Reported From Turkey". Mantar Dergisi. 6 (2): 43–57. doi:10.15318/Fungus.2015214064.