Miller set many quarterback records while playing at Ole Miss. He was followed by Eli Manning, who would go on to have an outstanding career for the Rebels and break several of his recently set records. As an Ole Miss Rebel, Miller completed 497 passes on 902 tries. He had 6,311 passing yards and 43 touchdowns. He led Ole Miss to three straight bowl games winning the Independence Bowl twice and losing the Music City Bowl. His overall record at Ole Miss was 22–13.