Recombination detection program

Developer(s)	Darren Martin
Stable release	RDP4 Beta 4.97
Preview release	RDP5 Beta 5.3
Operating system	Windows
Size	42.2 MB
Website	web.cbio.uct.ac.za/~darren/rdp.html

The Recombination detection program (RDP) is a computer program used to analyse nucleotide sequence data and identify evidence of genetic recombination. Besides applying a large number of different recombination detection methods it also implements various phylogenetic tree construction methods and recombination hotspot tests. The latest version is RDP4.^[1]

See also

• Computational phylogenetics

References

1. Martin, Darren P; Murrell, Ben; Golden, Michael; Khoosal, Arjun; Muhire, Brejnev (2015). "RDP4: Detection and analysis of recombination patterns in virus genomes". Virus Evolution. 1 (1): vev003. doi:10.1093/ve/vev003. PMC 5014473. PMID 27774277.

External links

• Program home page
• Virus Evolution paper