Ongoing hunting is a major threat to its survival. While the population cannot be accurately counted, they are often seen on camera-trapping studies which suggest a population well above being endangered. Gongshan Muntjacs have been observed within two large protected areas in Myanmar, Khakaborazi National Park and the Hponkanrazi Wildlife Sanctuary.[1]
Genetic studies have shown it to be very closely related to the hairy-fronted muntjac, possibly close enough to be considered the same species despite different coloration, though this position is disputed.[1] References of occurrence of the hairy-fronted muntjacMuntiacus crinifrons in Arunachal Pradesh are actually Gongshan muntjac.[5]