The branch, which started operating in the 1910s, won first place in the Heybeliada races, the first official competition in Turkey, organized under the auspices of the Naval SocietyPadişah Sultan Reşat on 24 July 1917. The branch represented Turkey for the first time in the Star (sailboat) class in 1936 at the 1936 Berlin Olympics with Behzat Baydar and Harun Ülman. The sailing branch, which was revived in 1952 when Deniz Bankası provided modern boats to the clubs, has taken the most distinguished place together with Istanbul Sailing Club and Karşıyaka in the Turkish Championships held since the 1930s, with a total of 210 first places, 163 second places and 109 third places until 2023.
Fenerbahçe athletes Tuğçe Subaşı won the World Championship in the Laser 4.7 class in 2002, Yiğit Yalçın Çıtak in the Laser Radial class, Arda Baykal in the Mediterranean Games in 1993 in the Optimist class, Haluk Babacan the Finn in 1993, Akif Muslubaş again in 1995 in the Finn, Utku Ören in 2002 in the Laser Radial, Yonca Yıldıral and İrem Özdemir in 2006 in the 470, Zeynep Yentür in 2009 and 2010 in the Optimist, Çağla Demirtaş in 2010 in the Laser Radial and Alican Kaynar in the Finn class again in 2010 in the Balkans. In addition to these championships, Aydın Yurdum came second in the World in the Laser Masters category in 1997, Azat Baykal, Levent Özgen and Erdil Uzaltan came fourth in Europe in the Dragon category in 1997, Azat Baykal, Arda Baykal and Erdil Uzaltan came fourth in the World in the Dragon category in 2004, Yonca Yıldıral and Özde Özdemir came third in the 470 World Juniors in 2006, Zeynep Yentür came second in Europe in the Optimist category in 2009 and Çağla Dönertaş came third in Europe in the Laser Radial category in 2012.
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