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The 1989–90 Combined Counties Football League season was the 12th in the history of the Combined Counties Football League, a football competition in England.

The league was won by Chipstead for the first time.

League table

The league was reduced to 18 clubs from 19 after Malden Vale were promoted to the Isthmian League, and no new clubs joined:

Pos	Team	Pld	W	D	L	GF	GA	GD	Pts	Promotion or relegation
1	Chipstead	34	24	7	3	83	32	+51	79
2	Merstham	34	24	6	4	79	28	+51	78
3	Cove	34	21	4	9	70	43	+27	67	Promoted to the Isthmian League Division Two South
4	Ash United	34	20	7	7	67	48	+19	67
5	Malden Town	34	19	7	8	69	42	+27	64
6	Farnham Town	34	16	7	11	66	44	+22	55
7	Steyning Town	34	16	4	14	45	49	−4	52
8	Cobham	34	14	9	11	45	48	−3	51
9	Farleigh Rovers	34	15	4	15	67	59	+8	49
10	Godalming Town	34	14	4	16	56	58	−2	46
11	Hartley Wintney	34	13	7	14	53	56	−3	46
12	Weybridge Town	34	13	5	16	52	50	+2	44	Club folded
13	Frimley Green	34	9	11	14	50	55	−5	38
14	Horley Town	34	9	6	19	47	64	−17	33
15	Westfield	34	8	8	18	50	71	−21	32
16	Bedfont	34	9	4	21	40	61	−21	31
17	Cranleigh	34	6	3	25	44	96	−52	21
18	Chobham	34	3	3	28	27	106	−79	12	Resigned to the Surrey County Premier League

Source: ^[1]
Rules for classification: The system of using goal difference to separate two teams tied on points was used.